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  2. SBML - Wikipedia

    en.wikipedia.org/wiki/SBML

    sbml .org. The Systems Biology Markup Language ( SBML) is a representation format, based on XML, for communicating and storing computational models of biological processes. [1] It is a free and open standard with widespread software support and a community of users and developers. SBML can represent many different classes of biological ...

  3. Protein secondary structure - Wikipedia

    en.wikipedia.org/wiki/Protein_secondary_structure

    The Dictionary of Protein Secondary Structure, in short DSSP, is commonly used to describe the protein secondary structure with single letter codes. The secondary structure is assigned based on hydrogen bonding patterns as those initially proposed by Pauling et al. in 1951 (before any protein structure had ever been experimentally determined ...

  4. List of open-source bioinformatics software - Wikipedia

    en.wikipedia.org/wiki/List_of_open-source...

    Open Bioinformatics Foundation. BioPHP. PHP language toolkit with classes for DNA and protein sequence analysis, alignment, database parsing, and other bioinformatics tools. Cross-platform. GPL v2. Open Bioinformatics Foundation. Biopython. Python language toolkit. Cross-platform.

  5. Genetic code - Wikipedia

    en.wikipedia.org/wiki/Genetic_code

    The code emerges at a transition when the mapping of codons to amino acids becomes nonrandom. The code's emergence is governed by the topology defined by the probable errors and is related to the map coloring problem. [109] Game theory: Models based on signaling games combine elements of game theory, natural selection and information channels ...

  6. Software rot - Wikipedia

    en.wikipedia.org/wiki/Software_rot

    Software rot ( bit rot, code rot, software erosion, software decay, or software entropy) is the degradation, deterioration, or loss of the use or performance of software over time. From a software user experience perspective, it is operating environmental evolution inclusive of hardware. The first cause for the objective loss to the practical ...

  7. Codebase - Wikipedia

    en.wikipedia.org/wiki/Codebase

    Codebase. In software development, a codebase (or code base) is a collection of source code used to build a particular software system, application, or software component. Typically, a codebase includes only human-written source code system files; thus, a codebase usually does not include source code files generated by tools (generated files ...

  8. Cryptanalysis - Wikipedia

    en.wikipedia.org/wiki/Cryptanalysis

    Cryptanalysis (from the Greek kryptós, "hidden", and analýein, "to analyze") refers to the process of analyzing information systems in order to understand hidden aspects of the systems. [ 1] Cryptanalysis is used to breach cryptographic security systems and gain access to the contents of encrypted messages, even if the cryptographic key is ...

  9. Talk:The Code Breaker - Wikipedia

    en.wikipedia.org/wiki/Talk:The_Code_Breaker

    Biology portal; The Code Breaker is part of the WikiProject Biology, an effort to build a comprehensive and detailed guide to biology on Wikipedia. Leave messages on the WikiProject talk page. Biology Wikipedia:WikiProject Biology Template:WikiProject Biology Biology articles: Low: This article has been rated as Low-importance on the project's ...